STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL52633.1Acyl-CoA dehydrogenase. (381 aa)    
Predicted Functional Partners:
SDL45112.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.998
SDM87020.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 0.996
SDL60230.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.994
SDL45085.1
Electron transfer flavoprotein beta subunit.
 
 
 0.988
SDL28236.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.861
SDL39656.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.853
SDN08663.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.830
SDM18004.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.814
SDM68838.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor; Manually curated.
  
 
 0.794
SDL80659.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.730
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.