STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL69931.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
SDM98774.1
Putative NADH-flavin reductase.
  
     0.740
SDM86466.1
NADH dehydrogenase.
 
      0.642
SDL69952.1
Transcriptional regulator, HxlR family.
  
    0.621
SDM82627.1
Uncharacterized Fe-S cluster protein YjdI.
   
    0.487
SDN08636.1
Hypothetical protein.
   
    0.436
SDL50062.1
Arginine deiminase.
   
    0.422
SDL22759.1
Hypothetical protein.
   
    0.405
SDL48835.1
Predicted N-acyltransferase, GNAT family.
   
    0.405
SDM46429.1
Hypothetical protein.
   
    0.405
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.