STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL77820.1Beta-glucosidase. (1011 aa)    
Predicted Functional Partners:
SDM57453.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
 0.921
SDM58872.1
Beta-glucosidase.
 
 
0.921
SDM09947.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
 0.916
SDM39916.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
 0.901
SDL88169.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.894
SDM01597.1
Hexosaminidase.
    
 0.869
SDL74220.1
D-alanyl-D-alanine carboxypeptidase.
 
 
 0.763
SDM47450.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
  
 0.756
SDL77785.1
Quinoprotein glucose dehydrogenase.
       0.752
SDM89041.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
    
 0.701
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.