STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL87351.1Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. (204 aa)    
Predicted Functional Partners:
SDL87328.1
Disulphide bond corrector protein DsbC.
 
     0.812
SDL87303.1
Cytochrome c peroxidase.
       0.773
SDL87275.1
Iron complex outermembrane recepter protein.
       0.592
SDL87379.1
Peroxiredoxin.
       0.558
SDL87248.1
Protein of unknown function.
       0.511
SDL87223.1
Cysteine desulfurase.
       0.457
SDM71925.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
  
     0.445
SDM54989.1
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.444
SDM72099.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2.
  
     0.443
SDM98313.1
L-proline dehydrogenase.
  
     0.415
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.