STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM00701.1Acetyltransferase (GNAT) domain-containing protein. (312 aa)    
Predicted Functional Partners:
SDM00665.1
DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.773
SDL75392.1
Hypothetical protein.
  
     0.690
SDM57353.1
Hypothetical protein.
  
     0.674
SDM00622.1
TIGR00255 family protein.
       0.645
SDM25045.1
Hypothetical protein.
  
     0.639
SDM01255.1
FlgD Ig-like domain-containing protein.
  
     0.600
SDM00591.1
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.581
SDM27218.1
Hypothetical protein.
  
     0.572
SDN08556.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.570
SDL59102.1
Tetratricopeptide repeat-containing protein.
  
     0.550
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.