STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM07047.1Neutral/alkaline non-lysosomal ceramidase, N-terminal. (451 aa)    
Predicted Functional Partners:
SDL24634.1
N-acetylglucosamine-6-phosphate deacetylase.
  
 0.678
SDL29829.1
N-acetylglucosamine-6-phosphate deacetylase.
  
 0.678
SDL72160.1
N-acetylglucosamine 6-phosphate deacetylase.
  
 0.678
SDM07022.1
Hypothetical protein.
       0.584
SDM66815.1
Cytochrome c.
  
     0.567
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.556
SDL45011.1
Predicted dehydrogenase.
  
     0.534
SDL80197.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.525
SDL51954.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.522
SDL99845.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.508
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.