STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM09975.1MFS transporter, MHS family, alpha-ketoglutarate permease. (429 aa)    
Predicted Functional Partners:
SDM06844.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.868
SDM71958.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
 0.842
SDM09999.1
Hypothetical protein.
       0.773
SDM66123.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.742
SDM89217.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.742
SDM09947.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.610
SDL56953.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.527
SDM57890.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
     
 0.515
SDL28236.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 
 0.512
SDM09919.1
Hypothetical protein.
       0.510
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.