STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM21097.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
SDL70246.1
XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.785
SDM90645.1
RNA polymerase Rpb6.
  
     0.719
SDL86896.1
Tfp pilus assembly protein PilF.
   
   0.635
SDM21070.1
Co-chaperonin GroES (HSP10).
       0.610
SDM04149.1
Outer membrane protein assembly factor BamA.
  
     0.596
SDL59776.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.568
SDM21123.1
Hypothetical protein.
       0.532
SDM47953.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
   
   0.514
SDN06487.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
   
   0.514
SDL58157.1
Hypothetical protein.
 
     0.463
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.