Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDL47232.1 | SDM26530.1 | SAMN04488090_0963 | SAMN04488090_3033 | RNA methyltransferase, TrmH family. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.469 |
| SDL47232.1 | SDM99180.1 | SAMN04488090_0963 | SAMN04488090_4719 | RNA methyltransferase, TrmH family. | 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family. | 0.516 |
| SDM26483.1 | SDM26507.1 | SAMN04488090_3031 | SAMN04488090_3032 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Gliding motility-associated C-terminal domain-containing protein. | 0.663 |
| SDM26483.1 | SDM26530.1 | SAMN04488090_3031 | SAMN04488090_3033 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.453 |
| SDM26507.1 | SDM26483.1 | SAMN04488090_3032 | SAMN04488090_3031 | Gliding motility-associated C-terminal domain-containing protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.663 |
| SDM26507.1 | SDM26530.1 | SAMN04488090_3032 | SAMN04488090_3033 | Gliding motility-associated C-terminal domain-containing protein. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.611 |
| SDM26507.1 | SDM26559.1 | SAMN04488090_3032 | SAMN04488090_3034 | Gliding motility-associated C-terminal domain-containing protein. | Transferase hexapeptide (six repeat-containing protein). | 0.434 |
| SDM26530.1 | SDL47232.1 | SAMN04488090_3033 | SAMN04488090_0963 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | RNA methyltransferase, TrmH family. | 0.469 |
| SDM26530.1 | SDM26483.1 | SAMN04488090_3033 | SAMN04488090_3031 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.453 |
| SDM26530.1 | SDM26507.1 | SAMN04488090_3033 | SAMN04488090_3032 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Gliding motility-associated C-terminal domain-containing protein. | 0.611 |
| SDM26530.1 | SDM26559.1 | SAMN04488090_3033 | SAMN04488090_3034 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Transferase hexapeptide (six repeat-containing protein). | 0.598 |
| SDM26530.1 | SDM43009.1 | SAMN04488090_3033 | SAMN04488090_3424 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.433 |
| SDM26530.1 | SDM54549.1 | SAMN04488090_3033 | SAMN04488090_3657 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.878 |
| SDM26530.1 | SDM77103.1 | SAMN04488090_3033 | SAMN04488090_4185 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Ribosomal protein L11 methyltransferase. | 0.495 |
| SDM26530.1 | SDM99180.1 | SAMN04488090_3033 | SAMN04488090_4719 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family. | 0.590 |
| SDM26530.1 | pheT | SAMN04488090_3033 | SAMN04488090_2468 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.511 |
| SDM26530.1 | trmB | SAMN04488090_3033 | SAMN04488090_1836 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.546 |
| SDM26559.1 | SDM26507.1 | SAMN04488090_3034 | SAMN04488090_3032 | Transferase hexapeptide (six repeat-containing protein). | Gliding motility-associated C-terminal domain-containing protein. | 0.434 |
| SDM26559.1 | SDM26530.1 | SAMN04488090_3034 | SAMN04488090_3033 | Transferase hexapeptide (six repeat-containing protein). | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.598 |
| SDM43009.1 | SDM26530.1 | SAMN04488090_3424 | SAMN04488090_3033 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.433 |
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