STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM29329.1Concanavalin A-like lectin/glucanases superfamily protein. (1152 aa)    
Predicted Functional Partners:
SDM10075.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.999
SDM71958.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 0.999
SDM29358.1
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.947
SDM08919.1
Rieske Fe-S protein.
  
 0.918
SDL96185.1
Hypothetical protein.
 
  0.904
SDM72135.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.861
SDL19781.1
Cytochrome c.
   
 0.839
SDM71996.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
   
 0.831
SDM23074.1
Uncharacterized membrane protein.
 
     0.788
SDL96217.1
Uncharacterized membrane protein.
 
     0.787
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.