STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM37932.1Thioredoxin reductase (NADPH). (322 aa)    
Predicted Functional Partners:
SDL82137.1
Thioredoxin.
  
 0.940
SDM96385.1
Bacillithiol system protein YtxJ.
 
 0.888
SDL50162.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.875
SDM02809.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.854
SDM02829.1
Thioredoxin 1; Belongs to the thioredoxin family.
  
 0.854
SDM27955.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.854
SDM47953.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.853
SDN06487.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.853
SDL46691.1
Glutamate synthase (NADH) large subunit.
    
 0.847
SDM06844.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.827
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.