STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM42601.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
SDM35898.1
Hypothetical protein.
  
     0.644
SDM03287.1
Capsule assembly protein Wzi.
  
     0.611
SDL82652.1
Hypothetical protein.
  
     0.603
SDM42566.1
Hypothetical protein.
       0.596
SDM26507.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.595
SDM46321.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
  
     0.577
SDL75331.1
Hypothetical protein.
  
     0.576
SDL57698.1
Capsule assembly protein Wzi.
  
     0.570
SDM07502.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.566
SDM29120.1
Hypothetical protein.
  
     0.564
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.