STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM46464.1Glycosyltransferase, GT2 family. (336 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.790
SDM46429.1
Hypothetical protein.
  
    0.778
SDL84206.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.746
SDL86896.1
Tfp pilus assembly protein PilF.
  
 
 0.723
SDM79298.1
Trehalose 6-phosphate synthase/phosphatase.
  
 
 0.710
SDL50771.1
Tetratricopeptide repeat-containing protein.
  
   0.592
SDM91375.1
Tetratricopeptide repeat-containing protein.
  
   0.583
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.566
SDM47536.1
Methyltransferase domain-containing protein.
 
     0.562
SDL59831.1
Tetratricopeptide repeat-containing protein.
  
 
 0.549
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.