STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM71958.1Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. (1022 aa)    
Predicted Functional Partners:
SDL24543.1
Cytochrome P460.
  
 0.999
SDL27329.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.999
SDL42212.1
Putative heme-binding domain-containing protein.
  
 0.999
SDL58827.1
Cytochrome c, mono-and diheme variants.
 
 0.999
SDL80502.1
Cytochrome c.
 
 0.999
SDL96088.1
Planctomycete cytochrome C.
  
 0.999
SDM08840.1
Cytochrome c2.
  
 0.999
SDM10128.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 0.999
SDM23014.1
Planctomycete cytochrome C.
  
 0.999
SDM29329.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
 0.999
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.