Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL16814.1 | SDL73366.1 | SAMN04488090_0219 | SAMN04488090_1595 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.731 |
SDL16814.1 | SDL80322.1 | SAMN04488090_0219 | SAMN04488090_1827 | Protein of unknown function. | Penicillin-binding protein 1A. | 0.470 |
SDL16814.1 | SDM09378.1 | SAMN04488090_0219 | SAMN04488090_2597 | Protein of unknown function. | Lipopolysaccharide export system permease protein; Manually curated. | 0.658 |
SDL16814.1 | SDM40073.1 | SAMN04488090_0219 | SAMN04488090_3333 | Protein of unknown function. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.428 |
SDL16814.1 | SDM83288.1 | SAMN04488090_0219 | SAMN04488090_4368 | Protein of unknown function. | PASTA domain, binds beta-lactams. | 0.680 |
SDL55080.1 | SDL80322.1 | SAMN04488090_1189 | SAMN04488090_1827 | Penicillin-binding protein 2. | Penicillin-binding protein 1A. | 0.932 |
SDL55080.1 | SDM03267.1 | SAMN04488090_1189 | SAMN04488090_2361 | Penicillin-binding protein 2. | Cell division protein FtsI (penicillin-binding protein 3). | 0.906 |
SDL55080.1 | SDM09378.1 | SAMN04488090_1189 | SAMN04488090_2597 | Penicillin-binding protein 2. | Lipopolysaccharide export system permease protein; Manually curated. | 0.583 |
SDL55080.1 | SDM40073.1 | SAMN04488090_1189 | SAMN04488090_3333 | Penicillin-binding protein 2. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.593 |
SDL55080.1 | SDM83288.1 | SAMN04488090_1189 | SAMN04488090_4368 | Penicillin-binding protein 2. | PASTA domain, binds beta-lactams. | 0.703 |
SDL73366.1 | SDL16814.1 | SAMN04488090_1595 | SAMN04488090_0219 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.731 |
SDL73366.1 | SDL80322.1 | SAMN04488090_1595 | SAMN04488090_1827 | Tetratricopeptide repeat-containing protein. | Penicillin-binding protein 1A. | 0.446 |
SDL73366.1 | SDM09378.1 | SAMN04488090_1595 | SAMN04488090_2597 | Tetratricopeptide repeat-containing protein. | Lipopolysaccharide export system permease protein; Manually curated. | 0.617 |
SDL73366.1 | SDM36101.1 | SAMN04488090_1595 | SAMN04488090_3214 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.735 |
SDL73366.1 | SDM40073.1 | SAMN04488090_1595 | SAMN04488090_3333 | Tetratricopeptide repeat-containing protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.406 |
SDL73366.1 | SDM83288.1 | SAMN04488090_1595 | SAMN04488090_4368 | Tetratricopeptide repeat-containing protein. | PASTA domain, binds beta-lactams. | 0.657 |
SDL80322.1 | SDL16814.1 | SAMN04488090_1827 | SAMN04488090_0219 | Penicillin-binding protein 1A. | Protein of unknown function. | 0.470 |
SDL80322.1 | SDL55080.1 | SAMN04488090_1827 | SAMN04488090_1189 | Penicillin-binding protein 1A. | Penicillin-binding protein 2. | 0.932 |
SDL80322.1 | SDL73366.1 | SAMN04488090_1827 | SAMN04488090_1595 | Penicillin-binding protein 1A. | Tetratricopeptide repeat-containing protein. | 0.446 |
SDL80322.1 | SDM03267.1 | SAMN04488090_1827 | SAMN04488090_2361 | Penicillin-binding protein 1A. | Cell division protein FtsI (penicillin-binding protein 3). | 0.933 |
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