STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM92323.1Predicted dehydrogenase. (397 aa)    
Predicted Functional Partners:
SDM92297.1
Nucleoside transporter.
       0.746
SDM81402.1
2-keto-myo-inositol dehydratase.
  
 
  0.694
SDM68231.1
Predicted dehydrogenase.
  
     0.608
SDM53678.1
Predicted dehydrogenase.
  
  
  0.555
SDL97601.1
Predicted dehydrogenase.
  
  
 
0.509
SDL45011.1
Predicted dehydrogenase.
  
     0.488
SDM55322.1
Uncharacterized protein, contains SIS (Sugar ISomerase) phosphosugar binding domain.
 
     0.483
SDM92262.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.461
SDM81279.1
Predicted dehydrogenase.
  
     0.437
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
   
   0.426
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.