STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM92418.1His Kinase A (phospho-acceptor) domain-containing protein. (382 aa)    
Predicted Functional Partners:
SDM24151.1
Signal transduction histidine kinase.
 
 0.992
SDL57807.1
PAS domain S-box-containing protein.
 
0.977
SDL56587.1
Signal transduction histidine kinase.
 
0.965
SDM18055.1
PAS domain S-box-containing protein.
 
 
0.963
SDL12273.1
Signal transduction histidine kinase.
 
 
0.954
SDM92386.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
   0.943
SDL12315.1
MCP methyltransferase, CheR-type.
  
  0.925
SDL57529.1
Chemotaxis protein methyltransferase CheR.
  
  0.924
SDL24069.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.921
SDL40948.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
0.908
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.