STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN08206.1Galactokinase; Belongs to the GHMP kinase family. (362 aa)    
Predicted Functional Partners:
SDM88004.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
 
 0.980
SDM57062.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.964
SDM90759.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.947
SDM43283.1
Aldose 1-epimerase.
  
 0.943
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 
0.909
SDN08178.1
Glucose-1-phosphate adenylyltransferase.
 
  
 0.879
SDN08153.1
Tat (twin-arginine translocation) pathway signal sequence.
 
   0.844
SDL96829.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.737
SDL76535.1
Galactose mutarotase.
  
 0.597
SDL42159.1
Protein of unknown function.
  
 0.596
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.