STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV46145.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EFV46146.1
Hypothetical protein.
     0.959
EFV44339.1
Hypothetical protein.
 
     0.890
EFV46147.1
Hypothetical protein.
 
     0.817
EPC05718.1
Hypothetical protein.
  
     0.775
EFV45640.1
Pyrrolysine biosynthesis protein PylC.
  
     0.768
EFV46144.2
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
  0.766
EFV46148.2
Hypothetical protein.
 
     0.742
EFV45011.2
Hypothetical protein.
 
     0.733
EFV46149.1
Methanosarcina family methyltransferase cognate corrinoid protein.
 
  
  0.722
EFV45641.1
Pyrrolysine biosynthesis radical SAM protein.
  
     0.717
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.