STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV46135.2Type VI secretion system Vgr family protein. (698 aa)    
Predicted Functional Partners:
EFV46134.2
Type VI secretion protein; Overlaps another CDS with the same product name.
 
 
 0.977
EFV46131.1
Hcp1 family type VI secretion system effector.
 
  
 0.975
EFV46133.1
Type VI secretion protein; Overlaps another CDS with the same product name.
 
  
 0.923
EFV46136.1
Hypothetical protein.
 
   
 0.916
EFV46130.1
EvpB/family type VI secretion protein.
 
  
 0.914
EFV46129.1
ImpA family type VI secretion-associated protein.
 
  
 0.907
EFV46154.1
DotU family type IV/VI secretion system protein.
 
  
 0.893
EPC05758.1
Type VI secretion protein.
 
  
 0.869
EFV46132.1
Type VI secretion system lysozyme-like protein.
  
  
 0.744
EFV46128.1
Type VI secretion lipoprotein.
  
  
 0.532
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.