STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV46063.14-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase. (486 aa)    
Predicted Functional Partners:
EFV46064.1
3-hydroxybutyryl-CoA dehydratase.
 
  
 0.911
EFV46065.1
butyryl-CoA dehydrogenase.
 
  
 0.871
EFV43126.1
Hypothetical protein.
  
 
 0.768
EFV46066.1
3-hydroxybutyryl-CoA dehydrogenase.
    
 0.744
EFV43368.2
Hypothetical protein.
 
  
 0.569
EFV46062.1
Malonic semialdehyde reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.533
EFV46067.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.499
EFV44040.1
Chorismate mutase.
      
 0.493
EFV45678.1
Hypothetical protein.
  
     0.456
EFV45594.1
Hypothetical protein.
    
  0.421
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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