STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV45612.1Anaerobic ribonucleoside-triphosphate reductase. (755 aa)    
Predicted Functional Partners:
EFV45611.1
Hypothetical protein.
 
     0.860
EFV45610.1
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
 
  
 0.841
EFV45778.1
Hypothetical protein.
 
     0.777
queE
Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
 
 0.705
EFV45539.1
Iron-sulfur cluster-binding protein.
    
   0.675
EFV46071.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.653
EFV45565.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.653
EFV46127.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.636
EFV45599.2
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.636
EFV43518.2
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.636
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.