STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV45516.1Hypothetical protein. (463 aa)    
Predicted Functional Partners:
EFV44021.1
TrkH family potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.909
EFV45232.1
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.767
EFV43912.2
Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
   0.720
EFV44605.1
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
  
 
  0.699
EFV43930.1
Monovalent cation:proton antiporter-2 (CPA2) family transporter.
     
 0.695
EFV46051.2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.683
EFV44560.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.683
EFV42985.1
Magnesium-translocating P-type ATPase.
 
 
 0.624
EFV45032.2
uroporphyrinogen-III C-methyltransferase.
  
    0.621
EFV43720.1
Hypothetical protein.
   
    0.604
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.