STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV45233.1Diguanylate cyclase (GGDEF) domain-containing protein. (255 aa)    
Predicted Functional Partners:
EFV45956.2
PAS domain S-box protein.
 0.992
EFV43115.1
Hypothetical protein.
 
 0.992
EFV43563.1
Hypothetical protein.
  
 0.991
EFV46071.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.988
EFV45565.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.988
EFV44908.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.988
EFV44365.2
Hypothetical protein.
 0.987
EFV45859.1
PTS system, lactose/cellobiose family IIC component.
 
 0.986
EFV43365.2
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.986
EFV45318.1
Hypothetical protein.
 0.985
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.