EFV45154.1 protein (Bilophila wadsworthia) - STRING interaction network

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Score

EFV45154.1

Hypothetical protein. (188 aa)

Predicted Functional Partners:

rpmF

0.966

rpsC

0.919

rpmB

0.892

rplK

0.890

rplM

0.874

rpsP

0.873

rplU

0.867

rpsF

0.864

rplD

0.856

rpsB

0.849

Your Current Organism:

Bilophila wadsworthia

NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFV45154.1	rplD	HMPREF0179_01034	HMPREF0179_02039	Hypothetical protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.856
EFV45154.1	rplK	HMPREF0179_01034	HMPREF0179_02082	Hypothetical protein.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.890
EFV45154.1	rplM	HMPREF0179_01034	HMPREF0179_00866	Hypothetical protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.874
EFV45154.1	rplU	HMPREF0179_01034	HMPREF0179_03536	Hypothetical protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.867
EFV45154.1	rpmB	HMPREF0179_01034	HMPREF0179_03026	Hypothetical protein.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.892
EFV45154.1	rpmF	HMPREF0179_01034	HMPREF0179_01033	Hypothetical protein.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.966
EFV45154.1	rpsB	HMPREF0179_01034	HMPREF0179_00932	Hypothetical protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.849
EFV45154.1	rpsC	HMPREF0179_01034	HMPREF0179_02034	Hypothetical protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.919
EFV45154.1	rpsF	HMPREF0179_01034	HMPREF0179_02747	Hypothetical protein.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.864
EFV45154.1	rpsP	HMPREF0179_01034	HMPREF0179_01198	Hypothetical protein.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.873
rplD	EFV45154.1	HMPREF0179_02039	HMPREF0179_01034	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Hypothetical protein.	0.856
rplD	rplK	HMPREF0179_02039	HMPREF0179_02082	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.992
rplD	rplM	HMPREF0179_02039	HMPREF0179_00866	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994
rplD	rplU	HMPREF0179_02039	HMPREF0179_03536	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplD	rpmB	HMPREF0179_02039	HMPREF0179_03026	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.981
rplD	rpmF	HMPREF0179_02039	HMPREF0179_01033	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.976
rplD	rpsB	HMPREF0179_02039	HMPREF0179_00932	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.998
rplD	rpsC	HMPREF0179_02039	HMPREF0179_02034	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplD	rpsF	HMPREF0179_02039	HMPREF0179_02747	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.990
rplD	rpsP	HMPREF0179_02039	HMPREF0179_01198	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990