Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFV42629.1 | EFV42644.1 | HMPREF0179_03550 | HMPREF0179_03565 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilC. | 0.869 |
| EFV42629.1 | EFV42646.1 | HMPREF0179_03550 | HMPREF0179_03567 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus secretin PilQ. | 0.615 |
| EFV42629.1 | EFV44230.1 | HMPREF0179_03550 | HMPREF0179_01956 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Hypothetical protein. | 0.446 |
| EFV42629.1 | EFV45124.1 | HMPREF0179_03550 | HMPREF0179_01052 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein G. | 0.763 |
| EFV42629.1 | EFV45130.1 | HMPREF0179_03550 | HMPREF0179_01058 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.865 |
| EFV42629.1 | EFV45131.1 | HMPREF0179_03550 | HMPREF0179_01059 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein D. | 0.490 |
| EFV42629.1 | EFV45133.1 | HMPREF0179_03550 | HMPREF0179_01061 | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Hypothetical protein. | 0.869 |
| EFV42644.1 | EFV42629.1 | HMPREF0179_03565 | HMPREF0179_03550 | Type IV pilus assembly protein PilC. | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.869 |
| EFV42644.1 | EFV42646.1 | HMPREF0179_03565 | HMPREF0179_03567 | Type IV pilus assembly protein PilC. | Type IV pilus secretin PilQ. | 0.952 |
| EFV42644.1 | EFV45124.1 | HMPREF0179_03565 | HMPREF0179_01052 | Type IV pilus assembly protein PilC. | Type II secretion system protein G. | 0.759 |
| EFV42644.1 | EFV45128.1 | HMPREF0179_03565 | HMPREF0179_01056 | Type IV pilus assembly protein PilC. | Hypothetical protein. | 0.541 |
| EFV42644.1 | EFV45130.1 | HMPREF0179_03565 | HMPREF0179_01058 | Type IV pilus assembly protein PilC. | Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.962 |
| EFV42644.1 | EFV45131.1 | HMPREF0179_03565 | HMPREF0179_01059 | Type IV pilus assembly protein PilC. | Type II secretion system protein D. | 0.634 |
| EFV42646.1 | EFV42629.1 | HMPREF0179_03567 | HMPREF0179_03550 | Type IV pilus secretin PilQ. | Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.615 |
| EFV42646.1 | EFV42644.1 | HMPREF0179_03567 | HMPREF0179_03565 | Type IV pilus secretin PilQ. | Type IV pilus assembly protein PilC. | 0.952 |
| EFV42646.1 | EFV44230.1 | HMPREF0179_03567 | HMPREF0179_01956 | Type IV pilus secretin PilQ. | Hypothetical protein. | 0.670 |
| EFV42646.1 | EFV45124.1 | HMPREF0179_03567 | HMPREF0179_01052 | Type IV pilus secretin PilQ. | Type II secretion system protein G. | 0.433 |
| EFV42646.1 | EFV45128.1 | HMPREF0179_03567 | HMPREF0179_01056 | Type IV pilus secretin PilQ. | Hypothetical protein. | 0.668 |
| EFV42646.1 | EFV45130.1 | HMPREF0179_03567 | HMPREF0179_01058 | Type IV pilus secretin PilQ. | Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.867 |
| EFV42646.1 | EFV45131.1 | HMPREF0179_03567 | HMPREF0179_01059 | Type IV pilus secretin PilQ. | Type II secretion system protein D. | 0.678 |
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