Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV45045.2Hypothetical protein. (258 aa)    
Predicted Functional Partners:
EFV45044.1
Hypothetical protein.
       0.788
EFV43790.1
Hypothetical protein.
 
 
 0.771
EFV44548.1
NADPH2:quinone reductase.
  
 
   0.726
EFV46012.2
Hypothetical protein.
  
 
   0.688
EFV44395.1
Hypothetical protein.
 
  
 0.629
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.583
EFV44496.1
Urea transporter.
  
     0.581
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.561
EFV43503.1
Hypothetical protein.
 
     0.530
EFV45264.1
Competence protein ComEA helix-hairpin-helix repeat region.
  
 
  0.519
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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