Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFV44937.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (160 aa)    
Predicted Functional Partners:
EFV42644.1
Type IV pilus assembly protein PilC.
 
  
 0.650
EFV45125.1
Hypothetical protein.
  
 
 0.613
EFV42645.1
Type IV pilus assembly protein PilB.
 
 
 0.586
EFV44229.1
Hypothetical protein.
 
 
 0.553
EFV45130.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.552
EFV45133.1
Hypothetical protein.
 
  
 0.546
EFV42646.1
Type IV pilus secretin PilQ.
  
   
 0.510
EFV42629.1
Leader peptidase (prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.496
EFV42631.1
Hypothetical protein.
  
    0.491
EFV45391.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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