Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV44855.2Hypothetical protein. (435 aa)    
Predicted Functional Partners:
EFV42609.1
Gluconate 2-dehydrogenase alpha chain.
 
 
 0.940
EFV44854.1
Hypothetical protein.
  
 0.938
EFV44031.1
Hypothetical protein.
   
 
 0.836
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.828
EFV45978.1
Nitrate reductase, beta subunit.
  
 
 0.767
EFV44856.1
Hypothetical protein.
 
  
 0.742
EFV44034.1
Molybdopterin oxidoreductase, membrane subunit.
   
 
 0.727
EFV43842.1
Molybdopterin oxidoreductase, membrane subunit.
   
 
 0.727
EFV43273.1
Hypothetical protein.
   
 
 0.727
EFV42608.1
Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.720
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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