STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44643.1Hydrogenase (NiFe) small subunit (hydA). (385 aa)    
Predicted Functional Partners:
EFV44642.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.996
EFV44641.1
Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
 
 0.995
EFV44255.1
Periplasmic [NiFe] hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.985
EFV43961.1
Hydrogenase large subunit.
 
 0.967
EFV43704.1
Ferredoxin hydrogenase.
 0.959
EFV44640.1
Hydrogenase expression/formation protein.
 
  
 0.955
EFV46051.2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.905
EFV44560.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.905
EFV44254.1
Hydrogenase expression/formation protein.
 
  
 0.826
EFV43475.1
Hydrogenase maturation protease.
 
  
 0.805
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.