STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44659.1YgiT-type zinc finger domain-containing protein. (131 aa)    
Predicted Functional Partners:
EFV44658.1
Motility quorum-sensing regulator/GCU-specific mRNA interferase toxin.
  
 
 0.980
EFV44475.2
RelB/DinJ family addiction module antitoxin.
 
   
 0.729
EFV44656.2
Hypothetical protein.
       0.701
EFV44657.1
Excisionase family DNA binding domain-containing protein.
       0.701
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.632
EFV45921.1
Hypothetical protein.
  
     0.609
EFV43499.1
Cell filamentation protein.
 
    0.573
EFV44655.1
Hypothetical protein.
       0.561
EFV46037.1
DNA (cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
  
  0.479
EFV44660.1
Hypothetical protein.
       0.473
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.