Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFV44527.1TIGR00156 family protein. (128 aa)    
Predicted Functional Partners:
EFV44296.2
Outer membrane autotransporter barrel domain-containing protein.
  
    0.732
EFV44801.2
Aromatic amino acid transporter.
  
     0.714
EFV42871.1
Hypothetical protein.
  
     0.683
macB
Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
     0.661
EFV45910.1
Deoxyribonuclease I.
  
     0.655
EFV43737.1
Hypothetical protein.
  
     0.655
EFV44287.1
Hypothetical protein.
  
  
 0.629
EFV44372.1
Hypothetical protein.
  
     0.624
EFV44325.1
Hypothetical protein.
  
     0.612
EFV43651.1
Hypothetical protein.
  
   
 0.552
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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