STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44352.1HlyD family type I secretion membrane fusion protein. (458 aa)    
Predicted Functional Partners:
EFV44353.2
Type I secretion system ATPase.
 0.995
EFV42814.1
Type I secretion system ATPase.
 0.978
EFV44354.2
TolC family type I secretion outer membrane protein.
 
 0.971
EFV44351.1
Hypothetical protein.
 
  
 0.955
EFV46170.2
TolC family type I secretion outer membrane protein.
 
 0.908
EPC05762.1
Hypothetical protein.
 
  
 0.811
macB
Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.781
EFV45615.1
VCBS protein.
 
  
 0.748
EFV44350.1
PAS domain S-box protein.
 
     0.740
EPC05682.1
VCBS protein.
 
  
 0.721
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.