STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44286.1DctP family TRAP transporter solute receptor. (344 aa)    
Predicted Functional Partners:
EFV45247.1
TRAP transporter, DctM subunit.
  
 0.838
EFV44834.1
TRAP transporter, DctM subunit.
  
 0.836
EFV46055.1
Hypothetical protein.
  
    0.797
EFV46054.1
TRAP transporter, DctM subunit.
 
    0.779
EFV46109.1
TRAP transporter, DctM subunit.
 
    0.778
EFV46096.1
TRAP transporter, DctM subunit.
 
    0.778
EFV45944.1
TRAP transporter, DctM subunit.
 
    0.778
EFV45238.1
TRAP transporter, DctM subunit.
 
    0.778
EFV44079.1
TRAP transporter, DctM subunit.
 
    0.778
EFV43533.1
TRAP transporter, DctM subunit.
 
    0.778
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.