STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44222.2Hypothetical protein. (109 aa)    
Predicted Functional Partners:
EPC05786.1
VirB4 family type IV secretion/conjugal transfer ATPase.
   
 0.912
EPC05785.1
Type IV secretion system protein VirB4.
   
 0.901
EFV44223.1
Type IV secretion system protein VirB3.
    
 0.890
EFV44221.1
P-type conjugative transfer ATPase TrbB.
    
 0.860
EFV44224.1
Type IV secretion system protein VirB5.
    
 0.833
EFV43546.1
Type IV secretion system protein VirB4.
   
 0.777
EFV43547.1
VirB4 family type IV secretion/conjugal transfer ATPase.
   
 0.777
EFV43548.1
Type IV secretion system protein VirB3.
   
 0.766
EFV44234.1
P-type conjugative transfer protein TrbG.
    
 0.709
EFV44235.1
Type IV secretion system protein VirB10.
    
 0.703
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.