Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV44226.2R64 PilN family type IVB pilus formation outer membrane protein; Belongs to the bacterial secretin family. (224 aa)    
Predicted Functional Partners:
EPC05787.1
Hypothetical protein.
      0.944
EFV44230.1
Hypothetical protein.
  
  
 0.805
EFV44229.1
Hypothetical protein.
  
  
 0.787
EFV44227.1
Hypothetical protein.
       0.783
EFV44228.1
Type IV pilus biogenesis protein PilP.
       0.773
EFV44231.1
Hypothetical protein.
       0.773
EFV43259.1
YscR/HrcR family type III secretion apparatus protein.
  
 
 0.735
EFV43252.2
YscJ/HrcJ family type III secretion apparatus lipoprotein.
  
 
 0.717
EFV43230.1
Type III secretion apparatus protein SpaR/YscT/HrcT.
  
 
 0.700
EFV45132.1
Hypothetical protein.
  
 
 0.695
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.