STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44230.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
EFV44229.1
Hypothetical protein.
 
 
 0.960
EFV44226.2
R64 PilN family type IVB pilus formation outer membrane protein; Belongs to the bacterial secretin family.
  
  
 0.804
EFV44227.1
Hypothetical protein.
     
 0.792
EFV44231.1
Hypothetical protein.
       0.775
EFV44228.1
Type IV pilus biogenesis protein PilP.
       0.773
EFV45130.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.764
EFV42645.1
Type IV pilus assembly protein PilB.
  
 
 0.764
EFV44232.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.758
EFV43833.2
Hypothetical protein.
   
  
 0.726
EFV42646.1
Type IV pilus secretin PilQ.
   
 
 0.670
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.