STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44178.1MATE efflux family protein. (457 aa)    
Predicted Functional Partners:
EFV44179.1
Hypothetical protein.
 
     0.798
EFV45161.1
DNA polymerase III, delta subunit.
  
     0.736
EFV46181.1
Hypothetical protein.
  
     0.702
EFV45114.1
Hypothetical protein.
  
     0.628
EFV43925.2
Hypothetical protein.
  
     0.615
EFV45274.1
Exoribonuclease II.
  
     0.602
EFV42696.2
MATE efflux family protein.
  
   
 0.585
EFV43589.1
MJ0042 family finger-like domain-containing protein.
  
     0.561
EFV44957.1
Pyruvate, water dikinase.
  
     0.537
EFV42722.1
Hypothetical protein.
  
     0.527
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.