STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV44121.1HlyD family secretion protein. (331 aa)    
Predicted Functional Partners:
EFV44120.1
Antibiotic transport system permease.
  
 0.980
EPC05896.1
ABC transporter ATP-binding protein.
  
 0.969
EFV44119.1
Antibiotic transport system permease.
  
 0.960
macB
Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.816
EFV44353.2
Type I secretion system ATPase.
  
 0.708
EFV42814.1
Type I secretion system ATPase.
  
 0.708
EFV45393.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 
 0.673
EFV44309.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 
 0.665
EFV45426.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 
 0.664
EFV46125.2
Hypothetical protein.
 
 0.655
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.