Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV43996.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
EFV42737.1
Hypothetical protein.
     
  0.900
EFV43997.1
Hypothetical protein.
 
     0.897
EFV44189.2
Hypothetical protein.
  
     0.556
EFV44963.2
Hypothetical protein.
  
     0.539
EFV45473.2
Hypothetical protein.
  
     0.518
EFV45414.1
Hypothetical protein.
  
     0.482
EFV44334.1
Hypothetical protein.
  
     0.456
EFV43403.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
     0.439
EFV43112.1
Hypothetical protein.
  
     0.435
EFV43167.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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