Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV43954.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
EFV43955.1
Hypothetical protein.
   0.997
EFV43953.1
Hypothetical protein.
 
   0.993
EFV43952.1
Heterodisulfide reductase subunit A.
 
   0.955
EFV43950.1
Heterodisulfide reductase subunit C.
 
    0.948
EFV43951.1
Heterodisulfide reductase subunit B.
 
    0.941
EFV44072.1
Hypothetical protein.
  
  
0.477
EFV45539.1
Iron-sulfur cluster-binding protein.
   
   0.474
EFV43877.1
Dihydroorotate dehydrogenase electron transfer subunit.
  
   0.456
EFV44717.1
ferredoxin-NADP+ reductase.
  
   0.422
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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