Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFV43795.1Lipopolysaccharide transport system ATP-binding protein. (249 aa)    
Predicted Functional Partners:
EFV43796.2
Hypothetical protein.
 
 
 0.995
EFV42824.1
Capsular polysaccharide transport system permease.
 
 
 0.981
EFV42826.2
BexC/CtrB/KpsE family polysaccharide export inner-membrane protein.
  
  
 0.823
EFV43794.1
Hypothetical protein.
  
   0.799
EFV43798.2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.799
EFV43797.1
Hypothetical protein.
       0.773
EFV42831.2
Capsular polysaccharide export protein.
  
  
 0.727
EFV43793.1
Hypothetical protein.
       0.682
EFV43138.2
Hypothetical protein.
  
  
 0.660
EFV42827.2
Hypothetical protein.
  
  
 0.660
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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