STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV43708.1Lysine-arginine-ornithine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. (252 aa)    
Predicted Functional Partners:
EFV43709.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 0.998
EFV43815.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
   0.980
EFV43817.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
   0.980
EFV45087.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
   0.979
EFV43599.2
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
   0.979
EFV42892.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
   0.979
EFV42894.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
   0.979
EFV43601.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
   0.978
EFV42893.2
Polar amino acid transport system ATP-binding protein.
 
 
 0.791
EFV44181.1
Hypothetical protein.
  
 
 0.788
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.