Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFV43715.1Sulfite reductase, dissimilatory-type subunit gamma. (105 aa)    
Predicted Functional Partners:
EFV44050.1
Sulfite reductase, dissimilatory-type subunit alpha.
 
 
 
 0.990
EFV44051.1
Sulfite reductase, dissimilatory-type subunit beta.
 
 
 
 0.979
EFV43846.1
Nitrate reductase 1, gamma subunit.
 
   
 0.857
EFV43845.1
Hypothetical protein.
 
 
 
 0.827
EFV43844.1
Hypothetical protein.
 
   
 0.776
EFV43842.1
Molybdopterin oxidoreductase, membrane subunit.
 
   
 0.757
EFV44950.1
Hypothetical protein.
 
 
 
 0.737
EFV43847.1
Hypothetical protein.
 
     0.726
EFV45494.2
Hypothetical protein.
  
     0.639
EFV43276.1
Hypothetical protein.
 
 
 
 0.621
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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