Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV43589.1MJ0042 family finger-like domain-containing protein. (246 aa)    
Predicted Functional Partners:
EFV43588.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.785
EFV43925.2
Hypothetical protein.
  
     0.775
EFV45161.1
DNA polymerase III, delta subunit.
  
     0.771
EFV43775.1
Hypothetical protein.
  
     0.769
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.761
EFV45473.2
Hypothetical protein.
  
     0.759
EFV46181.1
Hypothetical protein.
  
     0.752
EFV44582.1
Hypothetical protein.
  
     0.745
EFV45121.1
Hypothetical protein.
  
     0.744
EFV44583.1
Hypothetical protein.
  
     0.736
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
Server load: low (14%) [HD]