Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFV42688.1 | EFV43464.1 | HMPREF0179_03524 | HMPREF0179_02707 | Hydrogenase expression/formation protein HypE. | Hydrogenase assembly chaperone HypC/HupF. | 0.987 |
| EFV42688.1 | EFV43595.1 | HMPREF0179_03524 | HMPREF0179_02611 | Hydrogenase expression/formation protein HypE. | Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.987 |
| EFV42688.1 | EFV43641.1 | HMPREF0179_03524 | HMPREF0179_02539 | Hydrogenase expression/formation protein HypE. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.996 |
| EFV42688.1 | EFV43704.1 | HMPREF0179_03524 | HMPREF0179_02470 | Hydrogenase expression/formation protein HypE. | Ferredoxin hydrogenase. | 0.783 |
| EFV42688.1 | EFV43961.1 | HMPREF0179_03524 | HMPREF0179_02167 | Hydrogenase expression/formation protein HypE. | Hydrogenase large subunit. | 0.777 |
| EFV42688.1 | EFV44606.1 | HMPREF0179_03524 | HMPREF0179_01507 | Hydrogenase expression/formation protein HypE. | Hydrogenase accessory protein HypB. | 0.703 |
| EFV42688.1 | EFV44876.1 | HMPREF0179_03524 | HMPREF0179_01372 | Hydrogenase expression/formation protein HypE. | Hydrogenase accessory protein HypB. | 0.700 |
| EFV42688.1 | hypA | HMPREF0179_03524 | HMPREF0179_01508 | Hydrogenase expression/formation protein HypE. | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.675 |
| EFV42688.1 | hypA-2 | HMPREF0179_03524 | HMPREF0179_02197 | Hydrogenase expression/formation protein HypE. | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.677 |
| EFV43464.1 | EFV42688.1 | HMPREF0179_02707 | HMPREF0179_03524 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase expression/formation protein HypE. | 0.987 |
| EFV43464.1 | EFV43595.1 | HMPREF0179_02707 | HMPREF0179_02611 | Hydrogenase assembly chaperone HypC/HupF. | Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.787 |
| EFV43464.1 | EFV43641.1 | HMPREF0179_02707 | HMPREF0179_02539 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.994 |
| EFV43464.1 | EFV43704.1 | HMPREF0179_02707 | HMPREF0179_02470 | Hydrogenase assembly chaperone HypC/HupF. | Ferredoxin hydrogenase. | 0.565 |
| EFV43464.1 | EFV43961.1 | HMPREF0179_02707 | HMPREF0179_02167 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase large subunit. | 0.560 |
| EFV43464.1 | EFV44606.1 | HMPREF0179_02707 | HMPREF0179_01507 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase accessory protein HypB. | 0.761 |
| EFV43464.1 | EFV44876.1 | HMPREF0179_02707 | HMPREF0179_01372 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase accessory protein HypB. | 0.757 |
| EFV43464.1 | hypA | HMPREF0179_02707 | HMPREF0179_01508 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.563 |
| EFV43464.1 | hypA-2 | HMPREF0179_02707 | HMPREF0179_02197 | Hydrogenase assembly chaperone HypC/HupF. | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.604 |
| EFV43594.1 | EFV43595.1 | HMPREF0179_02610 | HMPREF0179_02611 | Hypothetical protein. | Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.682 |
| EFV43595.1 | EFV42688.1 | HMPREF0179_02611 | HMPREF0179_03524 | Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase expression/formation protein HypE. | 0.987 |
page 1 of 4