Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFV43286.1 | EFV43352.2 | HMPREF0179_02809 | HMPREF0179_02875 | LolC/E family lipoprotein releasing system, transmembrane protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.931 |
| EFV43286.1 | EFV44808.1 | HMPREF0179_02809 | HMPREF0179_01304 | LolC/E family lipoprotein releasing system, transmembrane protein. | Hypothetical protein. | 0.804 |
| EFV43286.1 | bamA | HMPREF0179_02809 | HMPREF0179_02807 | LolC/E family lipoprotein releasing system, transmembrane protein. | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.950 |
| EFV43286.1 | lolD | HMPREF0179_02809 | HMPREF0179_02808 | LolC/E family lipoprotein releasing system, transmembrane protein. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.993 |
| EFV43286.1 | lysS | HMPREF0179_02809 | HMPREF0179_02810 | LolC/E family lipoprotein releasing system, transmembrane protein. | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.799 |
| EFV43286.1 | macB | HMPREF0179_02809 | HMPREF0179_03170 | LolC/E family lipoprotein releasing system, transmembrane protein. | Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.974 |
| EFV43352.2 | EFV43286.1 | HMPREF0179_02875 | HMPREF0179_02809 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | LolC/E family lipoprotein releasing system, transmembrane protein. | 0.931 |
| EFV43352.2 | EFV45349.1 | HMPREF0179_02875 | HMPREF0179_00827 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.762 |
| EFV43352.2 | EPC05906.1 | HMPREF0179_02875 | HMPREF0179_05189 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.762 |
| EFV43352.2 | bamA | HMPREF0179_02875 | HMPREF0179_02807 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.613 |
| EFV43352.2 | lolD | HMPREF0179_02875 | HMPREF0179_02808 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.835 |
| EFV43352.2 | macB | HMPREF0179_02875 | HMPREF0179_03170 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.821 |
| EFV43709.1 | lolD | HMPREF0179_02475 | HMPREF0179_02808 | His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.725 |
| EFV44808.1 | EFV43286.1 | HMPREF0179_01304 | HMPREF0179_02809 | Hypothetical protein. | LolC/E family lipoprotein releasing system, transmembrane protein. | 0.804 |
| EFV44808.1 | EFV45349.1 | HMPREF0179_01304 | HMPREF0179_00827 | Hypothetical protein. | Hypothetical protein. | 0.762 |
| EFV44808.1 | EPC05906.1 | HMPREF0179_01304 | HMPREF0179_05189 | Hypothetical protein. | Hypothetical protein. | 0.762 |
| EFV44808.1 | lolD | HMPREF0179_01304 | HMPREF0179_02808 | Hypothetical protein. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.725 |
| EFV44808.1 | macB | HMPREF0179_01304 | HMPREF0179_03170 | Hypothetical protein. | Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.821 |
| EFV44873.1 | lolD | HMPREF0179_01369 | HMPREF0179_02808 | Nickel transport system ATP-binding protein; Overlaps another CDS with the same product name. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.901 |
| EFV45349.1 | EFV43352.2 | HMPREF0179_00827 | HMPREF0179_02875 | Hypothetical protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.762 |
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