STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV43303.1Hypothetical protein. (527 aa)    
Predicted Functional Partners:
EFV43302.2
Hypothetical protein.
    0.992
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 0.941
EFV44793.1
succinate-CoA ligase, beta subunit.
  
 0.941
EFV43627.1
succinate-CoA ligase, beta subunit.
  
 0.941
EFV46051.2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.885
EFV44560.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.885
EFV43299.2
Hypothetical protein.
 
   0.816
EFV43945.1
Fumarate reductase subunit C.
  
 
 0.772
EFV44072.1
Hypothetical protein.
  
 0.761
EFV43943.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 0.756
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.