STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV43353.1S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE. (976 aa)    
Predicted Functional Partners:
EFV45070.2
Hypothetical protein; Essential cell division protein.
   
 
 0.844
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
     
 0.805
EFV43915.2
ParB-like partition protein; Belongs to the ParB family.
  
   
 0.775
EFV45998.1
Hypothetical protein.
    
 
 0.765
EFV46012.2
Hypothetical protein.
    
 
 0.765
EFV45407.2
Hypothetical protein.
    
 
 0.765
EFV44392.1
Hypothetical protein.
    
 
 0.765
EFV44325.1
Hypothetical protein.
    
 
 0.765
EFV43223.1
Hypothetical protein.
    
 
 0.765
EPC05682.1
VCBS protein.
    
 
 0.765
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.