Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV43137.2Hypothetical protein. (192 aa)    
Predicted Functional Partners:
napA
Periplasmic nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.890
EFV43132.1
Hypothetical protein.
 
 
 0.865
EFV45402.1
Cytochrome c-552.
  
 
 0.828
EFV43136.1
Hypothetical protein.
     
 0.778
EFV43133.1
MauM/NapG family ferredoxin-type protein.
 
  
 0.773
EFV44698.1
DmsA/YnfE family anaerobic dimethyl sulfoxide reductase, A subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.692
EFV43115.1
Hypothetical protein.
  
 
 
 0.669
EFV45956.2
PAS domain S-box protein.
    
 
 0.619
EFV43563.1
Hypothetical protein.
    
 
 0.619
EFV45318.1
Hypothetical protein.
    
 
 0.612
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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